Package: mpack-dev Source: mpack Version: 0.8.0 Architecture: i386 Maintainer: Maho Nakata Installed-Size: 108232 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.4), libstdc++6 (>= 5.2), libgomp1, libquadmath0, libgmp-dev, libmpfr-dev, libmpc-dev, libqd-dev Conflicts: mpack-dev Provides: mpack-dev Filename: ./i386/mpack-dev_0.8.0_i386.deb Size: 19907004 MD5sum: b1afc3992acdc6ac4ac277b8c4f53f6e SHA1: cef4bceb3dae8b6a85edfc2a7ca302d126e6fc2e SHA256: 260b84926e4b805e40ff403d14dc093ea6800aa2e329ecdf83a99ffca3e18a87 Section: devel Priority: optional Description: mpack - mpack development files The MPACK is a multiprecision linear algebra package based on BLAS and LAPACK. This package is rewritten in C++, and supports several high precision libraries like GMP, MPFR and QD etc so that users can choose for user's convenience. The MPACK is a free software (2-clause BSD style license with original license by LAPACK). Package: mpack-dev Source: mpack Version: 0.8.0 Architecture: amd64 Maintainer: Maho Nakata Installed-Size: 119777 Depends: libc6 (>= 2.14), libgcc1 (>= 1:4.3), libstdc++6 (>= 5.2), libgomp1, libquadmath0, libgmp-dev, libmpfr-dev, libmpc-dev, libqd-dev Conflicts: mpack-dev Provides: mpack-dev Filename: ./amd64/mpack-dev_0.8.0_amd64.deb Size: 22861268 MD5sum: 285dd3818d436a89aee17c3c3079ab7f SHA1: 71cb54645e09291795cd80f5df6bea2d41d45bcc SHA256: ea08a673189cb40c5769d90152c005f08cf025a03e673e74980b7e6b606a6574 Section: devel Priority: optional Description: mpack - mpack development files The MPACK is a multiprecision linear algebra package based on BLAS and LAPACK. This package is rewritten in C++, and supports several high precision libraries like GMP, MPFR and QD etc so that users can choose for user's convenience. The MPACK is a free software (2-clause BSD style license with original license by LAPACK). Package: mpack-dev-dbgsym Source: mpack Version: 0.8.0 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Maho Nakata Installed-Size: 79484 Depends: mpack-dev (= 0.8.0) Filename: ./i386/mpack-dev-dbgsym_0.8.0_i386.deb Size: 78401158 MD5sum: e6913237db6c5c183118757749acdfdf SHA1: 2b343a1626991aeeb7fa3efd384a0f37b51e58a6 SHA256: aab2a5bffe5890bc8b0ec56c4b75746bf24e2295f6178b127288894ac373656c Section: debug Priority: extra Description: Debug symbols for mpack-dev Build-Ids: 0091e3a3c2026d44886183366cfe06f5f0f49d83 23e09a1f94bdfd7b1408e290ea5ad4fd332c00f0 29c8a244593daf24a44c45e6163b3c3e80abd05f 3779e91d3a4aaebe799fa092f8e62b9ed853706d 405c1b04a6fabde54a0d929d4db73c699c73aa25 58dc05f321ed6b956d0c338469f37bb1c270283c 5d9b4809f3e0d19a2bcb7d1278f705685cd053d7 66d30fcf08f6ab9cd1eb1f046ea9893a7c8caa93 b629e57ba34c94dee870b2c801dbab08285068c2 b97e9c5e8ee2c49e772a26488df7fc4df1ebc343 bc02d7c0d01b98a555f2239f8c636154adb28cdf ca984c4d22a26f7693cf8fc5d73a27dde39e0b51 d0abe1381d4fd19b3afc87d21ef30244237827bc dd44d3958f6be2b96b99f65a22a2a4e4fd481efa f18a3fb1ec89da56327c07e581bf1d0b8a21504c Package: mpack-dev-dbgsym Source: mpack Version: 0.8.0 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Maho Nakata Installed-Size: 91553 Depends: mpack-dev (= 0.8.0) Filename: ./amd64/mpack-dev-dbgsym_0.8.0_amd64.deb Size: 90362360 MD5sum: 746548330b8a963f0cdacff39714dfa9 SHA1: d9f558c53d03d64799f8a32bc234fc619c66633e SHA256: f02d2b7ee6f18f5720aba57a1f8e13f6a59c925b141f96919d637c95dc14c7cf Section: debug Priority: extra Description: Debug symbols for mpack-dev Build-Ids: 0bcacf704720183b58b9b90d79e75ae83fbb351f 0d976f30d0462373773f3d7fc829e69f1019721e 417d608fa276ca69c990f7eea5f21c487a804eb2 46926c96b70e788e0f350ea79e8e3f32d1c77526 56a952f5d9902ea3396a4f1ac86aa0871562357e 6c4b06af26fd7c10b556203d2c41ed9ae4ed82d7 855c9ca616abc4c4cbeb503c086657ad238da6c2 87c92a90d84d0c3555be46cca5f8b3caf6ca4907 a41cb1a12e9b035ff1ffef2140268d92b890adfe aec8fa925fea82f45e0220f8be696cdf29bc29f3 b43870083e2aadddf833e1e90d731ec4962fbfa4 b92e872daaed3e94dd763e844d258ed1aa20c4d3 ba4ff85accd182938fbc742f3367d26a5bbdeed6 f93634245fb84ea666aeb7df166b233f88d81cb1 fbc29653bc6d5b06afcf185d8ebef8068dd19e93 Package: pourrna Version: 1.1.0-1 Architecture: i386 Maintainer: Gregor Entzian Installed-Size: 1805 Depends: libc6 (>= 2.8), libgcc1 (>= 1:4.2), libstdc++6 (>= 6), viennarna-dev (>= 2.4.11) Conflicts: pourrna Provides: pourrna Filename: ./i386/pourrna_1.1.0-1_i386.deb Size: 261086 MD5sum: 23b62e4651bf2c43cdf3c6924e173a6a SHA1: 00a1fab735bbccf923463f94bf8fe2fae3546dfa SHA256: 0e4349f9481d426253194633699427ed5f52bfcd553e45196a5504161e650afe Section: science Priority: optional Description: Compute local minima and respective transition rates of an RNA energy landscape. pourRNA takes an RNA sequence as input and explores the landscape topology locally. This means the flooding algorithm will be applied for each gradient basin. The partition function for the basin and also for the transitions to neighbored minima will be calculated during the flooding. In order to speed up the computation of the rate matrix, local filtering techniques can be applied. These filters prune non-relevant transitions directly after flooding a gradient basin. As a result, the transition rates for the filtered landscape topology can be calculated faster than with global approaches. The advantage increases with increasing size of the energy landscape. Package: pourrna Version: 1.1.0-1 Architecture: amd64 Maintainer: Gregor Entzian Installed-Size: 1796 Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 6), viennarna-dev (>= 2.4.11) Conflicts: pourrna Provides: pourrna Filename: ./amd64/pourrna_1.1.0-1_amd64.deb Size: 259254 MD5sum: 22acbfff2a7a2456b8c9eb0aad4dd6e4 SHA1: d380d919006d4429a7cec39fee4a5eeaa7c5848d SHA256: 2ac110d75fb0102bfa7b6e2007fa58c2eab92913e7cc207adbefc19316b68515 Section: science Priority: optional Description: Compute local minima and respective transition rates of an RNA energy landscape. pourRNA takes an RNA sequence as input and explores the landscape topology locally. This means the flooding algorithm will be applied for each gradient basin. The partition function for the basin and also for the transitions to neighbored minima will be calculated during the flooding. In order to speed up the computation of the rate matrix, local filtering techniques can be applied. These filters prune non-relevant transitions directly after flooding a gradient basin. As a result, the transition rates for the filtered landscape topology can be calculated faster than with global approaches. The advantage increases with increasing size of the energy landscape. Package: pourrna Version: 1.2.0-1 Architecture: i386 Maintainer: Gregor Entzian Installed-Size: 1809 Depends: libc6 (>= 2.8), libgcc1 (>= 1:4.2), libstdc++6 (>= 6), viennarna-dev (>= 2.4.11) Conflicts: pourrna Provides: pourrna Filename: ./i386/pourrna_1.2.0-1_i386.deb Size: 261548 MD5sum: b295f2a3acacde70d6e86e85a709d0e3 SHA1: 041203ca39546a43284537c2ecb0129ab0fa83e8 SHA256: f3196386efb551e39950ab6a12842c770c166e6046ed787935e118524eddf34f Section: science Priority: optional Description: Compute local minima and respective transition rates of an RNA energy landscape. pourRNA takes an RNA sequence as input and explores the landscape topology locally. This means the flooding algorithm will be applied for each gradient basin. The partition function for the basin and also for the transitions to neighbored minima will be calculated during the flooding. In order to speed up the computation of the rate matrix, local filtering techniques can be applied. These filters prune non-relevant transitions directly after flooding a gradient basin. As a result, the transition rates for the filtered landscape topology can be calculated faster than with global approaches. The advantage increases with increasing size of the energy landscape. Package: pourrna Version: 1.2.0-1 Architecture: amd64 Maintainer: Gregor Entzian Installed-Size: 1796 Depends: libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 6), viennarna-dev (>= 2.4.11) Conflicts: pourrna Provides: pourrna Filename: ./amd64/pourrna_1.2.0-1_amd64.deb Size: 259772 MD5sum: a0fb59d6d9c9ba569fe9b9cc1564087b SHA1: 4a319fb84a5fa0ff38735acb1f32eec1b0073031 SHA256: 24b46ab6a9f60b5cca6d7e0ec4c89bcac97045535e34cf6c81879cada9d679b0 Section: science Priority: optional Description: Compute local minima and respective transition rates of an RNA energy landscape. pourRNA takes an RNA sequence as input and explores the landscape topology locally. This means the flooding algorithm will be applied for each gradient basin. The partition function for the basin and also for the transitions to neighbored minima will be calculated during the flooding. In order to speed up the computation of the rate matrix, local filtering techniques can be applied. These filters prune non-relevant transitions directly after flooding a gradient basin. As a result, the transition rates for the filtered landscape topology can be calculated faster than with global approaches. The advantage increases with increasing size of the energy landscape. Package: pourrna-dbgsym Source: pourrna Version: 1.1.0-1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Gregor Entzian Installed-Size: 1401 Depends: pourrna (= 1.1.0-1) Filename: ./i386/pourrna-dbgsym_1.1.0-1_i386.deb Size: 1328674 MD5sum: 9fe75ce3045030091f5ce78dfc7a40ba SHA1: b1e4a125fa1d3ac545bf20e3f298496820ce78b1 SHA256: e3f246ef65d273caa888af71dba3f195bc0247032df5aa54b467dfaebcecbaef Section: debug Priority: extra Description: Debug symbols for pourrna Build-Ids: 1c97f8e318cdabded4feac787c05c6400fa77c18 Package: pourrna-dbgsym Source: pourrna Version: 1.1.0-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Gregor Entzian Installed-Size: 1480 Depends: pourrna (= 1.1.0-1) Filename: ./amd64/pourrna-dbgsym_1.1.0-1_amd64.deb Size: 1398818 MD5sum: 655fee3170e9448e8a4685d6c8f97e3c SHA1: 843b10a94952fcdabd451fa8d62a1d1fcbf2de17 SHA256: 57cd7724dc650eb59199f53ca9ca8590265ff64b18d8dc78257e66bbd12d9432 Section: debug Priority: extra Description: Debug symbols for pourrna Build-Ids: e510002b921ff8cf1c044adb3a58354c07fabb34 Package: pourrna-dbgsym Source: pourrna Version: 1.2.0-1 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Gregor Entzian Installed-Size: 1397 Depends: pourrna (= 1.2.0-1) Filename: ./i386/pourrna-dbgsym_1.2.0-1_i386.deb Size: 1325118 MD5sum: bb41bda28852c1ae16f25944acd226d5 SHA1: a824b5e097ca937553c9066c58244292826e1139 SHA256: 89508e6ef424948fe6b791482bf545f6da05ad635d79ee911c75317d17c52967 Section: debug Priority: extra Description: Debug symbols for pourrna Build-Ids: 321ab8db264b16fc6007ebd064250b7a1f5f4ab6 Package: pourrna-dbgsym Source: pourrna Version: 1.2.0-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Gregor Entzian Installed-Size: 1476 Depends: pourrna (= 1.2.0-1) Filename: ./amd64/pourrna-dbgsym_1.2.0-1_amd64.deb Size: 1395768 MD5sum: d643e22992f5e171299b34f16db80db8 SHA1: 7a1b93e33b29ccc67b44925223d7526e4f842d89 SHA256: a84e54b4569cb1c0bf8ab991d0371e177361ef1c0863902b253adf9e16092bb7 Section: debug Priority: extra Description: Debug symbols for pourrna Build-Ids: 489627d2838b49d9468d9c2f24526c438f7423e3 Package: python3-rnaxplorer Source: rnaxplorer Version: 0.9.0 Architecture: i386 Maintainer: Gregor Entzian Installed-Size: 8 Depends: python3 Conflicts: python3-rnaxplorer Filename: ./i386/python3-rnaxplorer_0.9.0_i386.deb Size: 1680 MD5sum: 0a28e044daa0bf5ff5c1e310c7deeaea SHA1: d83c40f07d0061901a20a3d2b2492e1a300d0c88 SHA256: f6cdd31cee514c7dc59562df270eec42476505cf681c962bb391b54539de747f Section: python Priority: optional Description: Python 3 bindings to RNAxplorerlib The RNAxplorer class to access RNAxplorerlib C-library functions from within Python 3 scripts Package: python3-rnaxplorer Source: rnaxplorer Version: 0.9.0 Architecture: amd64 Maintainer: Gregor Entzian Installed-Size: 8 Depends: python3 Conflicts: python3-rnaxplorer Filename: ./amd64/python3-rnaxplorer_0.9.0_amd64.deb Size: 1682 MD5sum: bc25ac2f992ca74e05693a64dee818fc SHA1: a25df7da135c3bb4769c8cf29aefc9618bcdaaee SHA256: 808863ec458d497656f763db8147edeb6055b6d1a4bf78e08a3aad8944af1f51 Section: python Priority: optional Description: Python 3 bindings to RNAxplorerlib The RNAxplorer class to access RNAxplorerlib C-library functions from within Python 3 scripts Package: rnaxplorer Version: 0.9.0 Architecture: i386 Maintainer: Gregor Entzian Installed-Size: 8 Depends: viennarna-dev (>= 2.4.14) Recommends: python-rnaxplorer Conflicts: rnaxplorer Provides: rnaxplorer Filename: ./i386/rnaxplorer_0.9.0_i386.deb Size: 1794 MD5sum: 911f0f017588b5a83dc2ec98a2db56f9 SHA1: 940dab4752b98bb98ce6b57ea868a11a7f06bdc4 SHA256: ab017ec303a649adf25928516145609471c2ceebb5db90bacfddca957758e57c Section: science Priority: optional Description: Sample RNA secondary structures and explore the RNA energy landscape. 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